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Commit e01bd8f7 authored by Jules Sabban's avatar Jules Sabban
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Increase memory for STAR

parent bb59ab90
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1 merge request!21merge dev_jules
......@@ -145,11 +145,11 @@ process {
withName: SALMON_QUANT {
module = toolsModuleHash['SALMON']
time = { checkMax( 1.h * task.attempt, 'time' ) }
memory = { checkMax( 3.GB * task.attempt, 'memory' ) }
memory = { checkMax( 10.GB * task.attempt, 'memory' ) }
cpus = 8
publishDir = [
path: "${params.outdir}/AlignmentStats",
path: "${params.outdir}/alignmentStats",
mode: 'symlink',
pattern: '*'
]
......@@ -168,7 +168,7 @@ process {
time = { checkMax( 1.d * task.attempt, 'memory' ) }
publishDir = [
path: "${params.outdir}/AlignmentStats",
path: "${params.outdir}/alignmentStats",
mode: 'copy',
pattern: '*.log'
]
......
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